| Draft Picks | ||||||
| Overall | Rd | # | Orig Team | Curr Team | # | Player |
| 1 | 1 | 1 | NYM | 2025 Roman Anthony | ||
| 2 | 1 | 2 | TOR | 2025 Nick Kurtz | ||
| 3 | 1 | 3 | MIN | 2025 Drake Baldwin | ||
| 4 | 1 | 4 | CHW | 2025 Nolan McLean | ||
| 5 | 1 | 5 | PIT | 2025 Samuel Basallo | ||
| 6 | 1 | 6 | TBR | 2025 Cade Horton | ||
| 7 | 1 | 7 | MIA | 2025 Colson Montgomery | ||
| 8 | 1 | 8 | SDP | LAA | 2025 Caleb Durbin | |
| 9 | 1 | 9 | WAS | 2025 Marcelo Mayer | ||
| 10 | 1 | 10 | SFG | 2025 Matt Shaw | ||
| 11 | 1 | 11 | LAD | 2025 Carter Jensen | ||
| 12 | 1 | 12 | BOS | 2025 Trey Yesavage | ||
| 13 | 1 | 13 | ATH | 2025 Chase Burns | ||
| 14 | 1 | 14 | LAA | 2025 Noah Cameron | ||
| 15 | 1 | 15 | CIN | 2025 Bubba Chandler | ||
| 16 | 1 | 16 | HOU | MIN | 2025 Jacob Misiorowski | |
| 17 | 1 | 17 | KCR | 2025 Shane Smith | ||
| 18 | 1 | 18 | PHI | ATH | 2025 Sal Stewart | |
| 19 | 1 | 19 | COL | 2025 Luis Morales | ||
| 20 | 1 | 20 | ARI | 2025 Cam Schlittler | ||
| 21 | 1 | 21 | STL | 2025 Luke Keaschall | ||
| 22 | 1 | 22 | CHC | 2025 Bryce Eldridge | ||
| 23 | 1 | 23 | NYY | 2025 Kyle Teel | ||
| 24 | 1 | 24 | ATL | 2025 Agustin Ramirez | ||
| 25 | 1 | 25 | BAL | NYY | 2025 Connelly Early | |
| 26 | 1 | 26 | TEX | TBR | 2025 Dalton Rushing | |
| 27 | 1 | 27 | CLE | 2025 Daylen Lile | ||
| 28 | 1 | 28 | MIL | PHI | 2025 Brady House | |
| 29 | 1 | 29 | DET | 2025 Jac Caglianone | ||
| 30 | 1 | 30 | SEA | 2025 Moises Ballesteros | ||
| 31 | 2 | 1 | NYM | 2025 Jakob Marsee | ||
| 32 | 2 | 2 | TOR | 2025 Carson Williams | ||
| 33 | 2 | 3 | MIN | STL | 2025 Owen Caissie | |
| 34 | 2 | 4 | CHW | 2025 Cam Smith | ||
| 35 | 2 | 5 | PIT | 2025 Hyeseong Kim | ||
| 36 | 2 | 6 | TBR | 2025 Roki Sasaki | ||
| 37 | 2 | 7 | MIA | 2025 Dylan Beavers | ||
| 38 | 2 | 8 | SDP | LAA | 2025 Edgar Quero | |
| 39 | 2 | 9 | WAS | 2025 Payton Tolle | ||
| 40 | 2 | 10 | SFG | 2025 Kristian Campbell | ||
| 41 | 2 | 11 | LAD | 2025 Chad Patrick | ||
| 42 | 2 | 12 | BOS | 2025 Chase Meidroth | ||
| 43 | 2 | 13 | ATH | STL | 2025 Chandler Simpson | |
| 44 | 2 | 14 | LAA | 2025 Jack Dreyer | ||
| 45 | 2 | 15 | CIN | 2025 Harry Ford | ||
| 46 | 2 | 16 | HOU | MIL | 2025 Braxton Ashcraft | |
| 47 | 2 | 17 | KCR | 2025 Jake Mangum | ||
| 48 | 2 | 18 | PHI | 2025 Chase Dollander | ||
| 49 | 2 | 19 | COL | 2025 Cole Young | ||
| 50 | 2 | 20 | ARI | 2025 Jonah Tong | ||
| 51 | 2 | 21 | STL | 2025 Logan Henderson | ||
| 52 | 2 | 22 | CHC | 2025 Parker Messick | ||
| 53 | 2 | 23 | NYY | 2025 Max P. Muncy | ||
| 54 | 2 | 24 | ATL | 2025 Brice Matthews | ||
| 55 | 2 | 25 | BAL | 2025 Brandon Sproat | ||
| 56 | 2 | 26 | TEX | SDP | 2025 C.J. Kayfus | |
| 57 | 2 | 27 | CLE | BOS | 2025 Christian Moore | |
| 58 | 2 | 28 | MIL | SDP | 2025 Troy Melton | |
| 59 | 2 | 29 | DET | 2025 Ryan Bergert | ||
| 60 | 2 | 30 | SEA | CIN | 2025 Heriberto Hernandez | |
| 61 | 3 | 1 | NYM | 2025 Denzel Clarke | ||
| 62 | 3 | 2 | TOR | 2025 Ben Williamson | ||
| 63 | 3 | 3 | MIN | ATH | 2025 Luinder Avila | |
| 64 | 3 | 4 | CHW | 2025 Rafael Flores | ||
| 65 | 3 | 5 | PIT | MIN | 2025 Braydon Fisher | |
| 66 | 3 | 6 | TBR | 2025 Jacob Melton | ||
| 67 | 3 | 7 | MIA | 2025 Matt Svanson | ||
| 68 | 3 | 8 | SDP | MIN | 2025 Mike Vasil | |
| 69 | 3 | 9 | WAS | 2025 Alex Freeland | ||
| 70 | 3 | 10 | SFG | 2025 Logan Evans | ||
| 71 | 3 | 11 | LAD | 2025 Mick Abel | ||
| 72 | 3 | 12 | BOS | 2025 Brad Lord | ||
| 73 | 3 | 13 | ATH | TOR | 2025 Jhostynxon Garcia | |
| 74 | 3 | 14 | LAA | 2025 Liam Hicks | ||
| 75 | 3 | 15 | CIN | 2025 Didier Fuentes | ||
| 76 | 3 | 16 | HOU | MIL | 2025 Grant Taylor | |
| 77 | 3 | 17 | KCR | 2025 Tyler Tolbert | ||
| 78 | 3 | 18 | PHI | TBR | 2025 Robert Hassell | |
| 79 | 3 | 19 | COL | 2025 Jack Perkins | ||
| 80 | 3 | 20 | ARI | 2025 Colby Thomas | ||
| 81 | 3 | 21 | STL | 2025 David Morgan | ||
| 82 | 3 | 22 | CHC | 2025 Ian Seymour | ||
| 83 | 3 | 23 | NYY | 2025 Hunter Barco | ||
| 84 | 3 | 24 | ATL | 2025 Jose Corniell | ||
| 85 | 3 | 25 | BAL | NYY | 2025 Hunter Dobbins | |
| 86 | 3 | 26 | TEX | BAL | 2025 Jimmy Crooks | |
| 87 | 3 | 27 | CLE | TBR | 2025 Jeremiah Jackson | |
| 88 | 3 | 28 | MIL | 2025 George Valera | ||
| 89 | 3 | 29 | DET | 2025 Denzer Guzman | ||
| 90 | 3 | 30 | SEA | 2025 Zach Cole | ||
| 91 | 4 | 1 | NYM | 2025 Carson Whisenhunt | ||
| 92 | 4 | 2 | TOR | 2025 Mason Fluharty | ||
| 93 | 4 | 3 | MIN | 2025 A.J. Blubaugh | ||
| 94 | 4 | 4 | CHW | 2025 Otto Kemp | ||
| 95 | 4 | 5 | PIT | 2025 Kyle Karros | ||
| 96 | 4 | 6 | TBR | CLE | 2025 Alejandro Osuna | |
| 97 | 4 | 7 | MIA | 2025 Braxton Fulford | ||
| 98 | 4 | 8 | SDP | MIL | 2025 Tomoyuki Sugano | |
| 99 | 4 | 9 | WAS | 2025 Nathan Church | ||
| 100 | 4 | 10 | SFG | 2025 Cade Gibson | ||
| 101 | 4 | 11 | LAD | 2025 Troy Johnston | ||
| 102 | 4 | 12 | BOS | 2025 Ryan Ritter | ||
| 103 | 4 | 13 | ATH | 2025 Christian Koss | ||
| 104 | 4 | 14 | LAA | 2025 Bradgley Rodriguez | ||
| 105 | 4 | 15 | CIN | 2025 Juan M. Mejia | ||
| 106 | 4 | 16 | HOU | MIL | 2025 Ryan Johnson | |
| 107 | 4 | 17 | KCR | 2025 Tim Tawa | ||
| 108 | 4 | 18 | PHI | 2025 Colton Gordon | ||
| 109 | 4 | 19 | COL | 2025 Kyle Backhus | ||
| 110 | 4 | 20 | ARI | 2025 Drew Gilbert | ||
| 111 | 4 | 21 | STL | 2025 Kade Strowd | ||
| 112 | 4 | 22 | CHC | 2025 Craig Yoho | ||
| 113 | 4 | 23 | NYY | 2025 Blade Tidwell | ||
| 114 | 4 | 24 | ATL | 2025 Zac Veen | ||
| 115 | 4 | 25 | BAL | 2025 Elvis Alvarado | ||
| 116 | 4 | 26 | TEX | PHI | 2025 Jose M Fermin | |
| 117 | 4 | 27 | CLE | DET | 2025 Cole Henry | |
| 118 | 4 | 28 | MIL | MIA | 2025 Carlos Cortes | |
| 119 | 4 | 29 | DET | 2025 Maximo Acosta | ||
| 120 | 4 | 30 | SEA | 2025 Ryan Gusto | ||
| 121 | 5 | 1 | NYM | 2025 Alan Roden | ||
| 122 | 5 | 2 | TOR | ATH | 2025 Andrew Alvarez | |
| 123 | 5 | 3 | MIN | 2025 Wikelman Gonzalez | ||
| 124 | 5 | 4 | CHW | 2025 Nic Enright | ||
| 125 | 5 | 5 | PIT | 2025 McCade Brown | ||
| 126 | 5 | 6 | TBR | 2025 Yanquiel Fernandez | ||
| 127 | 5 | 7 | MIA | SEA | 2025 J.C. Escarra | |
| 128 | 5 | 8 | SDP | NYM | 2025 Tirso Ornelas | |
| 129 | 5 | 9 | WAS | 2025 Chase Petty | ||
| 130 | 5 | 10 | SFG | 2025 Chase Lee | ||
| 131 | 5 | 11 | LAD | 2025 Juan Morillo | ||
| 132 | 5 | 12 | BOS | CLE | 2025 John Rave | |
| 133 | 5 | 13 | ATH | 2025 PJ Poulin | ||
| 134 | 5 | 14 | LAA | SDP | 2025 Mason Barnett | |
| 135 | 5 | 15 | CIN | TEX | 2025 Thomas Harrington | |
| 136 | 5 | 16 | HOU | MIL | 2025 Gunnar Hoglund | |
| 137 | 5 | 17 | KCR | 2025 Luis Mey | ||
| 138 | 5 | 18 | PHI | 2025 Warming Bernabel | ||
| 139 | 5 | 19 | COL | 2025 Carson Seymour | ||
| 140 | 5 | 20 | ARI | 2025 Tyler Callihan | ||
| 141 | 5 | 21 | STL | MIN | 2025 Joel Peguero | |
| 142 | 5 | 22 | CHC | 2025 Joe Rock | ||
| 143 | 5 | 23 | NYY | 2025 Brandyn Garcia | ||
| 144 | 5 | 24 | ATL | 2025 Bob Seymour | ||
| 145 | 5 | 25 | BAL | 2025 Zach Maxwell | ||
| 146 | 5 | 26 | TEX | NYY | 2025 Rhylan Thomas | |
| 147 | 5 | 27 | CLE | 2025 Pierson Ohl | ||
| 148 | 5 | 28 | MIL | ATH | 2025 Justin Hagenman | |
| 149 | 5 | 29 | DET | TBR | 2025 Carson Palmquist | |
| 150 | 5 | 30 | SEA | 2025 Yaramil Hiraldo | ||
| 151 | 6 | 1 | NYM | 2025 Gage Workman | ||
| 152 | 6 | 2 | TOR | NYM | 2025 Jorbit Vivas | |
| 153 | 6 | 3 | MIN | MIA | 2025 Petey Halpin | |
| 154 | 6 | 4 | CHW | 2025 Blaine Crim | ||
| 155 | 6 | 5 | PIT | 2025 Mitch Farris | ||
| 156 | 6 | 6 | TBR | 2025 Willie MacIver | ||
| 157 | 6 | 7 | MIA | 2025 Doug Nikhazy | ||
| 158 | 6 | 8 | SDP | 2025 Ronny Simon | ||
| 159 | 6 | 9 | WAS | 2025 Philip Abner | ||
| 160 | 6 | 10 | SFG | 2025 Luis Curvelo | ||
| 161 | 6 | 11 | LAD | 2025 Brandon Young | ||
| 162 | 6 | 12 | BOS | 2025 Cody Freeman | ||
| 163 | 6 | 13 | ATH | PHI | 2025 Zach Agnos | |
| 164 | 6 | 14 | LAA | SDP | 2025 Shinnosuke Ogasawara | |
| 165 | 6 | 15 | CIN | 2025 Anthony Seigler | ||
| 166 | 6 | 16 | HOU | MIL | 2025 Ryan Fitzgerald | |
| 167 | 6 | 17 | KCR | 2025 Hayden Senger | ||
| 168 | 6 | 18 | PHI | 2025 Matthew Lugo | ||
| 169 | 6 | 19 | COL | 2025 Victor Mesa | ||
| 170 | 6 | 20 | ARI | 2025 Jayden Murray | ||
| 171 | 6 | 21 | STL | BOS | 2025 Travis Adams | |
| 172 | 6 | 22 | CHC | 2025 Cesar Prieto | ||
| 173 | 6 | 23 | NYY | 2025 Ryan Rolison | ||
| 174 | 6 | 24 | ATL | 2025 Tim Elko | ||
| 175 | 6 | 25 | BAL | 2025 Hayden Harris | ||
| 176 | 6 | 26 | TEX | PHI | 2025 Andrew Hoffmann | |
| 177 | 6 | 27 | CLE | 2025 Josh Simpson | ||
| 178 | 6 | 28 | MIL | MIA | 2025 Christian Montes De Oca | |
| 179 | 6 | 29 | DET | 2025 Evan Sisk | ||
| 180 | 6 | 30 | SEA | 2025 Eduarniel Nunez | ||
| 181 | 7 | 1 | NYM | |||
| 182 | 7 | 2 | TOR | |||
| 183 | 7 | 3 | MIN | |||
| 184 | 7 | 4 | CHW | 2025 Will Wilson | ||
| 185 | 7 | 5 | PIT | |||
| 186 | 7 | 6 | TBR | TOR | 2025 Paxton Schultz | |
| 187 | 7 | 7 | MIA | |||
| 188 | 7 | 8 | SDP | |||
| 189 | 7 | 9 | WAS | |||
| 190 | 7 | 10 | SFG | 2025 Will Robertson | ||
| 191 | 7 | 11 | LAD | 2025 Chad Stevens | ||
| 192 | 7 | 12 | BOS | |||
| 193 | 7 | 13 | ATH | 2025 Cody Laweryson | ||
| 194 | 7 | 14 | LAA | |||
| 195 | 7 | 15 | CIN | 2025 Tristan Peters | ||
| 196 | 7 | 16 | HOU | MIL | 2025 Justin Dean | |
| 197 | 7 | 17 | KCR | 2025 Grant Wolfram | ||
| 198 | 7 | 18 | PHI | |||
| 199 | 7 | 19 | COL | |||
| 200 | 7 | 20 | ARI | |||
| 201 | 7 | 21 | STL | MIA | 2025 Taylor Rashi | |
| 202 | 7 | 22 | CHC | 2025 Jonathan Pintaro | ||
| 203 | 7 | 23 | NYY | |||
| 204 | 7 | 24 | ATL | |||
| 205 | 7 | 25 | BAL | |||
| 206 | 7 | 26 | TEX | 2025 Matt Gorski | ||
| 207 | 7 | 27 | CLE | 2025 Logan VanWey | ||
| 208 | 7 | 28 | MIL | 2025 Carlos Duran | ||
| 209 | 7 | 29 | DET | |||
| 210 | 7 | 30 | SEA | 2025 Dylan Smith | ||
| 211 | 8 | 1 | NYM | |||
| 212 | 8 | 2 | TOR | |||
| 213 | 8 | 3 | MIN | |||
| 214 | 8 | 4 | CHW | |||
| 215 | 8 | 5 | PIT | |||
| 216 | 8 | 6 | TBR | |||
| 217 | 8 | 7 | MIA | |||
| 218 | 8 | 8 | SDP | |||
| 219 | 8 | 9 | WAS | |||
| 220 | 8 | 10 | SFG | |||
| 221 | 8 | 11 | LAD | |||
| 222 | 8 | 12 | BOS | 2025 Paul Gervase | ||
| 223 | 8 | 13 | ATH | |||
| 224 | 8 | 14 | LAA | |||
| 225 | 8 | 15 | CIN | |||
| 226 | 8 | 16 | HOU | |||
| 227 | 8 | 17 | KCR | |||
| 228 | 8 | 18 | PHI | |||
| 229 | 8 | 19 | COL | |||
| 230 | 8 | 20 | ARI | 2025 Alan Rangel | ||
| 231 | 8 | 21 | STL | |||
| 232 | 8 | 22 | CHC | |||
| 233 | 8 | 23 | NYY | 2025 Zak Kent | ||
| 234 | 8 | 24 | ATL | |||
| 235 | 8 | 25 | BAL | |||
| 236 | 8 | 26 | TEX | |||
| 237 | 8 | 27 | CLE | |||
| 238 | 8 | 28 | MIL | |||
| 239 | 8 | 29 | DET | |||
| 240 | 8 | 30 | SEA | |||